BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C04SP1|AL429185
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig932 1921 0.0
>3x_Contig932
Length = 3027
Score = 1921 bits (968), Expect = 0.0
Identities = 990/994 (99%), Gaps = 3/994 (0%)
Strand = Plus / Plus
Query: 1 attatcttatctggaagttttaagacattctacttcatctgtttgtcaatttctcttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 attatcttatctggaagttttaagacattctacttcatctgtttgtcaatttctcttagt 416
Query: 61 gtatctcaaacaaaccaggtaaaaagaattaattagtataacactagtaacatgccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtatctcaaacaaaccaggtaaaaagaattaattagtataacactagtaacatgccacca 476
Query: 121 aagaagcaagtagaggaaaagaaggttctattaggccgtccaggtaataacttgaaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aagaagcaagtagaggaaaagaaggttctattaggccgtccaggtaataacttgaaggca 536
Query: 181 ggtatcgttggtttagctaacgttggtaaatctacttttttccaagccattactagatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ggtatcgttggtttagctaacgttggtaaatctacttttttccaagccattactagatgt 596
Query: 241 ccattgggtaacccagctaactacccattcgcaaccattgatccagaagaagctagagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ccattgggtaacccagctaactacccattcgcaaccattgatccagaagaagctagagtc 656
Query: 301 attgttccatctccaagattcgatactctaagtgaaatttacaagccagcttccaaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attgttccatctccaagattcgatactctaagtgaaatttacaagccagcttccaaagtt 716
Query: 361 ccagctcatttgactgtttacgatattgctggtttgactaagggtgcttctgctggtgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ccagctcatttgactgtttacgatattgctggtttgactaagggtgcttctgctggtgaa 776
Query: 421 ggtctaggtaatgcctttttgtcccatatcagatctgtcgattccatctaccaagtggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ggtctaggtaatgcctttttgtcccatatcagatctgtcgattccatctaccaagtggtc 836
Query: 481 cgttgtttcgatgatgctgaaattattcatattgaaggtgatgttgatccagttcgtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 cgttgtttcgatgatgctgaaattattcatattgaaggtgatgttgatccagttcgtgat 896
Query: 541 ttggatatcatcaacactgaattgagattgaaggatattgaattctctgaaaagcacttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ttggatatcatcaacactgaattgagattgaaggatattgaattctctgaaaagcacttg 956
Query: 601 gaaagtattgaaaaaattaccagaagaggtggtcaatctttggaagttaaacaaaagaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 gaaagtattgaaaaaattaccagaagaggtggtcaatctttggaagttaaacaaaagaag 1016
Query: 661 gaagaagccgaattggttactaagatcattgaacttttgaaatccggtcaaagagtcgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gaagaagccgaattggttactaagatcattgaacttttgaaatccggtcaaagagtcgct 1076
Query: 721 aatcaatcttggtctactaaggaggtcgaaattatcaactctatgttcttgttgacagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 aatcaatcttggtctactaaggaggtcgaaattatcaactctatgttcttgttgacagca 1136
Query: 781 aaaccttctatttatttgattaacttatccgaaagagattatatcagaaagaagaacaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aaaccttctatttatttgattaacttatccgaaagagattatatcagaaagaagaacaag 1196
Query: 841 catttgttgaagattaaggaatgggttgacaaatactccccaggtgatttgatcattcca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 catttgttgaagattaaggaatgggttgacaaatactccccaggtgatttgatcattcca 1256
Query: 901 ttctctgtctgtytagaag-aaaattatcccatatgacagaagaagaagctgaagaag-a 958
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1257 ttctctgtctgtctagaagaaaaattatcccatatgacagaagaagaagctgaagaagaa 1316
Query: 959 ctaaag-acctaggcgttcaatctgctctaccaa 991
|||||| |||||||||||||||||||||||||||
Sbjct: 1317 ctaaagaacctaggcgttcaatctgctctaccaa 1350
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,260
Number of Sequences: 1807
Number of extensions: 10260
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)